Biogeographic stochastic mapping bsm

WebJan 11, 2024 · Based on the parameters of the best supported biogeographic model (DEC or DEC + j), we performed Biogeographic Stochastic Mapping (BSM), as implemented in the BioGeoBEARS R … Webbiogeography, the study of the geographic distribution of plants, animals, and other forms of life. It is concerned not only with habitation patterns but also with the factors responsible for variations in distribution. Strictly …

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WebDefines functions runBSM. # Runs biogeographic stochastic mapping # (non-stratified, or stratified, versions, read from the # input res object) # # The 'stochastic_mapping_inputs_list' object comes from: # # Non-stratified: # # # stochastic_mapping_inputs_list2 = get_inputs_for_stochastic_mapping_stratified … WebFeb 4, 2024 · boot_DES: Bootstrap fossil biogeography bsm_DES: Biogeographic stochastic mapping for fossil biogeography gen_sim_df: Template to simulate fossil … ctr ck5608a https://frikingoshop.com

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WebDec 26, 2024 · Biogeographic stochastic mapping (BSM) analyses on the maximum clade credibility tree were completed and compared to BSM analyses on 1,000 trees randomly sampled from the posterior distribution of trees resulting from the dating analysis. We found the Dombeyoideae crown node diverged ca. 53 million years ago out of a … WebRun the biogeographic stochastic mapping set.seed(seed=as.numeric(Sys.time())) runBSMslow = TRUE BSM_output = runBSM(res, stochastic_mapping_inputs_list = … WebJul 9, 2024 · Best-fitting models were used to perform biogeographic stochastic mapping (BSM), implemented in BioGeoBEARS (Matzke, 2013; Dupin et al., 2024) using 100 … ctrc humboldt

BGB_BSM_multiple_trees/BioGeoBEARS_posterior_trees_count

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Biogeographic stochastic mapping bsm

BioGeoBEARS/runBSM_v1.R at master - Github

WebJun 17, 2024 · The Biogeographic Stochastic Mapping (BSM) results indicate the presence of numerous dispersal events, some requiring long-distance dispersal throughout the entirety of the Asteraceae’s … WebLTST plot from a single biogeographic stochastic map (BSM) Firstly we will load data from a single BSM and transform it into an LTST data table that has time steps as rows, …

Biogeographic stochastic mapping bsm

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Web# Runs biogeographic stochastic mapping # (non-stratified, or stratified, versions, read from the # input res object) # # The 'stochastic_mapping_inputs_list' object comes from: WebMar 4, 2024 · Input files, R scripts, output files and plots for ancestral biogeographic range reconstruction and Bayesian Stochastic Mapping (BSM) of Syngnathiformes. 10_Diversification_rates.gtar Input files, commands, output files for …

Webplural biogeographies. : a branch of biology that deals with the geographical distribution of animals and plants. biogeographic. -ˌjē-ə-ˈgraf-ik. adjective. or biogeographical. -i-kəl. WebEchinoderms make up a substantial component of Ordovician marine invertebrates, yet their speciation and dispersal history as inferred within a rigorous phylogenetic and statistical …

WebMar 1, 2024 · For each of the randomly sampled trees, a BAYAREALIKE + J BioGeoBEARS (BGB) run estimating ancestral ranges and events was performed, as well as biogeographic stochastic mapping (BSM) replicates to quantify the number and types of biogeographic events and estimate the number of lineages through time by area … WebSep 1, 2024 · Finally, we carried out a biogeographic stochastic mapping (BSM) analysis to determine the main processes driving current distributions of the group. Results show …

WebBiogeographic stochastic mapping results for the diploporan and other blastozoan species across the three Ordovician times. Mean values, standard deviations (SDs), and …

WebDispersals have been shown to be critical to the evolution of the long isolated but megadiverse flora of Madagascar and the surrounding islands of the western Indian Ocean, but we are just beginning to understand the directionality of these dispersals. With more than half of its species occurring in … earth taken 2 no flashWebOct 20, 2024 · We estimated the number and type of biogeographic events using BSM implemented in BioGeoBEARS (Matzke, 2015) as done in other studies (e.g., Dupin et … earth taken hacked unblockedWebJan 5, 2024 · For comparison, we also inferred occurrence of immigrations through time using a biogeographic stochastic mapping (BSM) approach . To account for phylogenetic uncertainty of eight missing genera, we … ctrc in binghamton nyWebMay 1, 2024 · The biogeographic stochastic mapping (BSM) results indicate that most biogeographical events can be explained by within-area speciation (76%) and dispersals (21%, including 19% events of founder-event speciation). Only a few events involved vicariance (3%) (SI Appendix, Table S3). earth taken unblocked 66WebOct 10, 2024 · Numbers and types of biogeographical events were estimated under the best-fitting models by using Biogeographic Stochastic Mapping (BSM). For both … ctr ck3316Web#biogeographic stochastic mapping # TRUE runs n_stochastic_maps biogeographic stochastic maps for each tree below; # FALSE loads previous results run_BSM = TRUE … earth taken 3 gameWebBiogeographic stochastic mapping (BSM) analyses on the maximum clade credibility tree were completed and compared to BSM analyses on 1,000 trees randomly sampled from the posterior distribution of trees resulting from the dating analysis. We found the Dombeyoideae crown node diverged ca. 53 million years ago out of a broad ancestral … earth taken logo